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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs72786508 chr10:45836731 C/A AGAP8 chr10:51224681-51371321:- 0.45 6.02 3.57E-9 Box Plot
THCA rs72788092 chr10:45837300 A/G AGAP8 chr10:51224681-51371321:- 0.47 6.28 7.84E-10 Box Plot
THCA rs72788093 chr10:45841568 C/G AGAP8 chr10:51224681-51371321:- 0.45 6.02 3.57E-9 Box Plot
THCA rs72788095 chr10:45846404 T/C AGAP8 chr10:51224681-51371321:- 0.45 6.02 3.57E-9 Box Plot
THCA rs72788096 chr10:45846569 A/G AGAP8 chr10:51224681-51371321:- 0.45 6.02 3.57E-9 Box Plot
THCA rs72789735 chr10:45875554 C/T AGAP8 chr10:51224681-51371321:- 0.46 5.94 5.59E-9 Box Plot
THCA rs72796464 chr10:45905894 T/C AGAP8 chr10:51224681-51371321:- 0.43 6.3 6.8E-10 Box Plot
THCA rs72798038 chr16:50149163 C/T NELF chr9:140342025-140353786:- 0.45 5.91 6.53E-9 Box Plot
THCA rs72798040 chr16:50149693 T/C NELF chr9:140342025-140353786:- 0.45 5.91 6.53E-9 Box Plot
THCA rs72809952 chr10:88940996 A/T FAM35B chr10:46897641-46939143:+ 0.27 5.93 5.68E-9 Box Plot
THCA rs72823262 chr2:101126586 C/G LOC285359 chr3:101431278-101432259:+ 0.3 5.93 5.77E-9 Box Plot
THCA rs72831633 chr2:112945932 T/G RGPD5 chr2:110550335-110615272:+ -0.53 -7.23 1.92E-12 Box Plot
THCA rs72831634 chr2:112946796 A/G RGPD5 chr2:110550335-110615272:+ -0.53 -7.23 1.92E-12 Box Plot
THCA rs72831636 chr2:112948248 G/A RGPD5 chr2:110550335-110615272:+ -0.53 -7.23 1.92E-12 Box Plot
THCA rs72831638 chr2:112949212 C/G RGPD5 chr2:110550335-110615272:+ -0.53 -7.14 3.55E-12 Box Plot